Please post all the hints, questions and comments that you can think of. There is NO DUMB THOUGHT AT THIS POINT IN TIME.
First, with the basics. What I have.
1. 01 Crew Cab S10 4wd
2. 6.0 LQ4 Stock, no mods except headers.
3. Manual 5 Speed Trans, NV3500- Cummins 5.9 internals.
I had an LS1 in it previously. It was a great engine, ran great, just not what you would need to tow your toys or tractors around, much less state to state. Everything worked as if it were completely factory. A/C, cruise, gauges and so on. Had a years time in the build. Sold that and moved on to an LQ4 6.0. Got everything swapped, made some changes for dissipating heat issues and other weakening areas.
I got the engine fired, ran half ass, and started studying some other stock programs from the same year trucks. Got a decent tune, drive it everyday, log my data and make some small adjustments. I have very little knowledge of how to tune, learning as I go.
My biggest problem is this, The engine will free rev, in neutral, to the rev limiter of 6200. In gear driving, it wont go past 4800 on a WOT pull. It just plains out and seems to have a type of soft limiter like you have hit the top speed limit, but has no such limit.
You ask the questions, make the comments and I will do the research. And hopefully overcome this.