Originally Posted by
gofastwclass
I realize this is a week old, but did you flip the switch from 4L80E to 4L60E? If so, that won't work. The 4L60E uses a different pinout on the harness and the logic within the PCM is slightly different. I know from experience going from a 4L60E to an 80 will result in strange / no shifting and odd lockup behaviour and I can only assume similar would happen the other way.
I would ensure the wiring is proper for whichever transmission you have installed, then contact support to have the appropriate segment installed in your file so you don't waste credits on a second file.